using for loop to install conda package
This commit is contained in:
217
.CondaPkg/env/Lib/site-packages/scipy/_lib/_testutils.py
vendored
Normal file
217
.CondaPkg/env/Lib/site-packages/scipy/_lib/_testutils.py
vendored
Normal file
@@ -0,0 +1,217 @@
|
||||
"""
|
||||
Generic test utilities.
|
||||
|
||||
"""
|
||||
|
||||
import os
|
||||
import re
|
||||
import sys
|
||||
import numpy as np
|
||||
import inspect
|
||||
|
||||
|
||||
__all__ = ['PytestTester', 'check_free_memory', '_TestPythranFunc']
|
||||
|
||||
|
||||
class FPUModeChangeWarning(RuntimeWarning):
|
||||
"""Warning about FPU mode change"""
|
||||
pass
|
||||
|
||||
|
||||
class PytestTester:
|
||||
"""
|
||||
Pytest test runner entry point.
|
||||
"""
|
||||
|
||||
def __init__(self, module_name):
|
||||
self.module_name = module_name
|
||||
|
||||
def __call__(self, label="fast", verbose=1, extra_argv=None, doctests=False,
|
||||
coverage=False, tests=None, parallel=None):
|
||||
import pytest
|
||||
|
||||
module = sys.modules[self.module_name]
|
||||
module_path = os.path.abspath(module.__path__[0])
|
||||
|
||||
pytest_args = ['--showlocals', '--tb=short']
|
||||
|
||||
if doctests:
|
||||
raise ValueError("Doctests not supported")
|
||||
|
||||
if extra_argv:
|
||||
pytest_args += list(extra_argv)
|
||||
|
||||
if verbose and int(verbose) > 1:
|
||||
pytest_args += ["-" + "v"*(int(verbose)-1)]
|
||||
|
||||
if coverage:
|
||||
pytest_args += ["--cov=" + module_path]
|
||||
|
||||
if label == "fast":
|
||||
pytest_args += ["-m", "not slow"]
|
||||
elif label != "full":
|
||||
pytest_args += ["-m", label]
|
||||
|
||||
if tests is None:
|
||||
tests = [self.module_name]
|
||||
|
||||
if parallel is not None and parallel > 1:
|
||||
if _pytest_has_xdist():
|
||||
pytest_args += ['-n', str(parallel)]
|
||||
else:
|
||||
import warnings
|
||||
warnings.warn('Could not run tests in parallel because '
|
||||
'pytest-xdist plugin is not available.')
|
||||
|
||||
pytest_args += ['--pyargs'] + list(tests)
|
||||
|
||||
try:
|
||||
code = pytest.main(pytest_args)
|
||||
except SystemExit as exc:
|
||||
code = exc.code
|
||||
|
||||
return (code == 0)
|
||||
|
||||
|
||||
class _TestPythranFunc:
|
||||
'''
|
||||
These are situations that can be tested in our pythran tests:
|
||||
- A function with multiple array arguments and then
|
||||
other positional and keyword arguments.
|
||||
- A function with array-like keywords (e.g. `def somefunc(x0, x1=None)`.
|
||||
Note: list/tuple input is not yet tested!
|
||||
|
||||
`self.arguments`: A dictionary which key is the index of the argument,
|
||||
value is tuple(array value, all supported dtypes)
|
||||
`self.partialfunc`: A function used to freeze some non-array argument
|
||||
that of no interests in the original function
|
||||
'''
|
||||
ALL_INTEGER = [np.int8, np.int16, np.int32, np.int64, np.intc, np.intp]
|
||||
ALL_FLOAT = [np.float32, np.float64]
|
||||
ALL_COMPLEX = [np.complex64, np.complex128]
|
||||
|
||||
def setup_method(self):
|
||||
self.arguments = {}
|
||||
self.partialfunc = None
|
||||
self.expected = None
|
||||
|
||||
def get_optional_args(self, func):
|
||||
# get optional arguments with its default value,
|
||||
# used for testing keywords
|
||||
signature = inspect.signature(func)
|
||||
optional_args = {}
|
||||
for k, v in signature.parameters.items():
|
||||
if v.default is not inspect.Parameter.empty:
|
||||
optional_args[k] = v.default
|
||||
return optional_args
|
||||
|
||||
def get_max_dtype_list_length(self):
|
||||
# get the max supported dtypes list length in all arguments
|
||||
max_len = 0
|
||||
for arg_idx in self.arguments:
|
||||
cur_len = len(self.arguments[arg_idx][1])
|
||||
if cur_len > max_len:
|
||||
max_len = cur_len
|
||||
return max_len
|
||||
|
||||
def get_dtype(self, dtype_list, dtype_idx):
|
||||
# get the dtype from dtype_list via index
|
||||
# if the index is out of range, then return the last dtype
|
||||
if dtype_idx > len(dtype_list)-1:
|
||||
return dtype_list[-1]
|
||||
else:
|
||||
return dtype_list[dtype_idx]
|
||||
|
||||
def test_all_dtypes(self):
|
||||
for type_idx in range(self.get_max_dtype_list_length()):
|
||||
args_array = []
|
||||
for arg_idx in self.arguments:
|
||||
new_dtype = self.get_dtype(self.arguments[arg_idx][1],
|
||||
type_idx)
|
||||
args_array.append(self.arguments[arg_idx][0].astype(new_dtype))
|
||||
self.pythranfunc(*args_array)
|
||||
|
||||
def test_views(self):
|
||||
args_array = []
|
||||
for arg_idx in self.arguments:
|
||||
args_array.append(self.arguments[arg_idx][0][::-1][::-1])
|
||||
self.pythranfunc(*args_array)
|
||||
|
||||
def test_strided(self):
|
||||
args_array = []
|
||||
for arg_idx in self.arguments:
|
||||
args_array.append(np.repeat(self.arguments[arg_idx][0],
|
||||
2, axis=0)[::2])
|
||||
self.pythranfunc(*args_array)
|
||||
|
||||
|
||||
def _pytest_has_xdist():
|
||||
"""
|
||||
Check if the pytest-xdist plugin is installed, providing parallel tests
|
||||
"""
|
||||
# Check xdist exists without importing, otherwise pytests emits warnings
|
||||
from importlib.util import find_spec
|
||||
return find_spec('xdist') is not None
|
||||
|
||||
|
||||
def check_free_memory(free_mb):
|
||||
"""
|
||||
Check *free_mb* of memory is available, otherwise do pytest.skip
|
||||
"""
|
||||
import pytest
|
||||
|
||||
try:
|
||||
mem_free = _parse_size(os.environ['SCIPY_AVAILABLE_MEM'])
|
||||
msg = '{0} MB memory required, but environment SCIPY_AVAILABLE_MEM={1}'.format(
|
||||
free_mb, os.environ['SCIPY_AVAILABLE_MEM'])
|
||||
except KeyError:
|
||||
mem_free = _get_mem_available()
|
||||
if mem_free is None:
|
||||
pytest.skip("Could not determine available memory; set SCIPY_AVAILABLE_MEM "
|
||||
"variable to free memory in MB to run the test.")
|
||||
msg = '{0} MB memory required, but {1} MB available'.format(
|
||||
free_mb, mem_free/1e6)
|
||||
|
||||
if mem_free < free_mb * 1e6:
|
||||
pytest.skip(msg)
|
||||
|
||||
|
||||
def _parse_size(size_str):
|
||||
suffixes = {'': 1e6,
|
||||
'b': 1.0,
|
||||
'k': 1e3, 'M': 1e6, 'G': 1e9, 'T': 1e12,
|
||||
'kb': 1e3, 'Mb': 1e6, 'Gb': 1e9, 'Tb': 1e12,
|
||||
'kib': 1024.0, 'Mib': 1024.0**2, 'Gib': 1024.0**3, 'Tib': 1024.0**4}
|
||||
m = re.match(r'^\s*(\d+)\s*({0})\s*$'.format('|'.join(suffixes.keys())),
|
||||
size_str,
|
||||
re.I)
|
||||
if not m or m.group(2) not in suffixes:
|
||||
raise ValueError("Invalid size string")
|
||||
|
||||
return float(m.group(1)) * suffixes[m.group(2)]
|
||||
|
||||
|
||||
def _get_mem_available():
|
||||
"""
|
||||
Get information about memory available, not counting swap.
|
||||
"""
|
||||
try:
|
||||
import psutil
|
||||
return psutil.virtual_memory().available
|
||||
except (ImportError, AttributeError):
|
||||
pass
|
||||
|
||||
if sys.platform.startswith('linux'):
|
||||
info = {}
|
||||
with open('/proc/meminfo', 'r') as f:
|
||||
for line in f:
|
||||
p = line.split()
|
||||
info[p[0].strip(':').lower()] = float(p[1]) * 1e3
|
||||
|
||||
if 'memavailable' in info:
|
||||
# Linux >= 3.14
|
||||
return info['memavailable']
|
||||
else:
|
||||
return info['memfree'] + info['cached']
|
||||
|
||||
return None
|
||||
Reference in New Issue
Block a user